/EXTERNAL Roadmap/K006502_K006503_K006504_K006505_4_lane_gembs/SRX259094_2_lanes
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 699918546 | 100.00 % | 349959273 | 100.00 % | 349959273 | 100.00 % |
| General Reads | 686806259 | 98.13 % | 344009943 | 98.30 % | 342796316 | 97.95 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 1 | 0.00 % | 0 | 0.00 % | 1 | 0.00 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 13112286 | 1.87 % | 5949330 | 1.70 % | 7162956 | 2.05 % |
| Bisulfite_reads C2T | 357882734 | 51.13 % | 179277642 | 51.23 % | 178605092 | 51.04 % |
| Bisulfite_reads G2A | 328923526 | 46.99 % | 164732301 | 47.07 % | 164191225 | 46.92 % |
| Concept | Value |
|---|---|
| Unique Fragments | 259382351 |
| Average Unique | 74.12 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 25639821007 | 36.27 % | 9850455029 | 27.87 % | 15789365978 | 44.67 % |
| Base Counts Overall C | 9571162767 | 13.54 % | 640988852 | 1.81 % | 8930173915 | 25.27 % |
| Base Counts Overall G | 9633273214 | 13.63 % | 9026974513 | 25.54 % | 606298701 | 1.72 % |
| Base Counts Overall T | 25134178222 | 35.55 % | 15475027186 | 43.78 % | 9659151036 | 27.33 % |
| Base Counts Overall N | 713337936 | 1.01 % | 352440993 | 1.00 % | 360896943 | 1.02 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | NA |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 322425764 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 100 | 349959273 |
| 100 | 349959273 |
| Insert Size Histogram |
|---|
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