/EXTERNAL Roadmap/K006516_K006517_K006518_K006519_K006520_5_lane_gembs/SRX263892_1_lanes

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SAMPLE K006516_K006517_K006518_K006519_K006520_5_lane_gembs LANE SRX263892_1_lanes

Mapping Stats (Reads)

Concept Total Reads % Pair One Reads % Pair Two Reads %
Sequenced Reads 260093541 100.00 % 260093541 100.00 % 0 0.00 %
General Reads 218046434 83.83 % 218046434 83.83 % 0 0.00 %
Reads in Control sequences 0 0.00 % 0 0.00 % 0 0.00 %
Reads under conversion control 1157326 0.44 % 1157326 0.44 % 0 0.00 %
Reads over conversion control 0 0.00 % 0 0.00 % 0 0.00 %
Unmapped reads 40889781 15.72 % 40889781 15.72 % 0 0.00 %
Bisulfite_reads C2T 110020676 42.30 % 110020676 42.30 % 0 0.00 %
Bisulfite_reads G2A 109183084 41.98 % 109183084 41.98 % 0 0.00 %



Uniqueness (Fragments)

Concept Value
Unique Fragments 177248454
Average Unique 80.86 %



Mapping Stats (Bases)

Concept Total Bases % Pair One Bases % Pair Two Bases %
Base Counts Overall A 7984263428 30.39 %
Base Counts Overall C 207291137 0.79 %
Base Counts Overall G 5229810580 19.91 %
Base Counts Overall T 12247815782 46.62 %
Base Counts Overall N 600266714 2.29 %



Bisulfite Conversion Rate

Bisulfite Conversion Type Conversion Rate
Conversion Rate 0.9950688756389288
Over Conversion Rate NA



Mapping Quality

Mapping Quality Histogram
SRX263892_1_lanes.mapq.png



Read Length

Read Length Reads
100 260093541