/EXTERNAL Roadmap/K006516_K006517_K006518_K006519_K006520_5_lane_gembs/SRX388736_8_lanes

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SAMPLE K006516_K006517_K006518_K006519_K006520_5_lane_gembs LANE SRX388736_8_lanes

Mapping Stats (Reads)

Concept	Total Reads	%	Pair One Reads	%	Pair Two Reads	%
Sequenced Reads	1399210419	100.00 %	1399210419	100.00 %	0	0.00 %
General Reads	1335353213	95.44 %	1335353213	95.44 %	0	0.00 %
Reads in Control sequences	0	0.00 %	0	0.00 %	0	0.00 %
Reads under conversion control	3021692	0.22 %	3021692	0.22 %	0	0.00 %
Reads over conversion control	0	0.00 %	0	0.00 %	0	0.00 %
Unmapped reads	60835514	4.35 %	60835514	4.35 %	0	0.00 %
Bisulfite_reads C2T	675181884	48.25 %	675181884	48.25 %	0	0.00 %
Bisulfite_reads G2A	663193021	47.40 %	663193021	47.40 %	0	0.00 %

Uniqueness (Fragments)

Concept	Value
Unique Fragments	1142582530
Average Unique	85.37 %

Mapping Stats (Bases)

Concept	Total Bases	%	Pair One Bases	%	Pair Two Bases	%
Base Counts Overall A	43687932754	30.91 %
Base Counts Overall C	1222977580	0.87 %
Base Counts Overall G	27495016706	19.46 %
Base Counts Overall T	67339343224	47.65 %
Base Counts Overall N	1574982055	1.11 %

Bisulfite Conversion Rate

Bisulfite Conversion Type	Conversion Rate
Conversion Rate	0.9957520283859673
Over Conversion Rate	NA

Mapping Quality

Mapping Quality Histogram

Read Length

Read Length	Reads
100	1399210419