/EXTERNAL Roadmap/K006525_K006526_K006527_K006528_K006529_5_lane_gembs

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SAMPLE K006525_K006526_K006527_K006528_K006529_5_lane_gembs




Mapping Stats (Reads)

Concept Total Reads %
Sequenced Reads 1970863133 100.00 %
General Reads 1930238002 97.94 %
Reads in Control sequences 0 0.00 %
Reads under conversion control 7274347 0.37 %
Reads over conversion control 0 0.00 %
Unmapped reads 33350784 1.69 %
Bisulfite_reads C2T 991203134 50.29 %
Bisulfite_reads G2A 946309215 48.01 %



Uniqueness (Fragments)

Concept Value
Unique Fragments 1582621994
Average Unique 81.68 %



Mapping Stats (Bases)

Concept Total Bases %
Base Counts Overall A 44867515348 25.88 %
Base Counts Overall C 1757454548 1.01 %
Base Counts Overall G 37257497436 21.49 %
Base Counts Overall T 69550360384 40.11 %
Base Counts Overall N 19961096712 11.51 %



Bisulfite Conversion Rate

Bisulfite Conversion Type Conversion Rate
Conversion Rate 0.994547569050907
Over Conversion Rate NA



Mapping Quality

Mapping Quality Histogram
K006525_K006526_K006527_K006528_K006529_5_lane_gembs.mapq.png



Mapping Lanes Reports

LANE REPORTS
SRX043405_9_lanes
SRX043408_5_lanes
SRX043406_16_lanes
SRX043404_9_lanes
SRX043407_6_lanes