/EXTERNAL Roadmap/K006525_K006526_K006527_K006528_K006529_5_lane_gembs/SRX043405_9_lanes

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SAMPLE K006525_K006526_K006527_K006528_K006529_5_lane_gembs LANE SRX043405_9_lanes

Mapping Stats (Reads)

Concept Total Reads % Pair One Reads % Pair Two Reads %
Sequenced Reads 280959768 100.00 % 280959768 100.00 % 0 0.00 %
General Reads 275644802 98.11 % 275644802 98.11 % 0 0.00 %
Reads in Control sequences 0 0.00 % 0 0.00 % 0 0.00 %
Reads under conversion control 885804 0.32 % 885804 0.32 % 0 0.00 %
Reads over conversion control 0 0.00 % 0 0.00 % 0 0.00 %
Unmapped reads 4429162 1.58 % 4429162 1.58 % 0 0.00 %
Bisulfite_reads C2T 141244082 50.27 % 141244082 50.27 % 0 0.00 %
Bisulfite_reads G2A 135286524 48.15 % 135286524 48.15 % 0 0.00 %



Uniqueness (Fragments)

Concept Value
Unique Fragments 228498355
Average Unique 82.63 %



Mapping Stats (Bases)

Concept Total Bases % Pair One Bases % Pair Two Bases %
Base Counts Overall A 6895205236 28.67 %
Base Counts Overall C 284495345 1.18 %
Base Counts Overall G 5856431110 24.35 %
Base Counts Overall T 10728702679 44.61 %
Base Counts Overall N 283971489 1.18 %



Bisulfite Conversion Rate

Bisulfite Conversion Type Conversion Rate
Conversion Rate 0.9937854466934538
Over Conversion Rate NA



Mapping Quality

Mapping Quality Histogram
SRX043405_9_lanes.mapq.png



Read Length

Read Length Reads
84 30321922
85 222833757
82 27804089