/EXTERNAL Roadmap/K006525_K006526_K006527_K006528_K006529_5_lane_gembs/SRX043406_16_lanes

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SAMPLE K006525_K006526_K006527_K006528_K006529_5_lane_gembs LANE SRX043406_16_lanes

Mapping Stats (Reads)

Concept Total Reads % Pair One Reads % Pair Two Reads %
Sequenced Reads 480010945 100.00 % 480010945 100.00 % 0 0.00 %
General Reads 470600556 98.04 % 470600556 98.04 % 0 0.00 %
Reads in Control sequences 0 0.00 % 0 0.00 % 0 0.00 %
Reads under conversion control 1547992 0.32 % 1547992 0.32 % 0 0.00 %
Reads over conversion control 0 0.00 % 0 0.00 % 0 0.00 %
Unmapped reads 7862397 1.64 % 7862397 1.64 % 0 0.00 %
Bisulfite_reads C2T 242285505 50.47 % 242285505 50.47 % 0 0.00 %
Bisulfite_reads G2A 229863043 47.89 % 229863043 47.89 % 0 0.00 %



Uniqueness (Fragments)

Concept Value
Unique Fragments 366780229
Average Unique 77.68 %



Mapping Stats (Bases)

Concept Total Bases % Pair One Bases % Pair Two Bases %
Base Counts Overall A 9211154488 28.53 %
Base Counts Overall C 377988064 1.17 %
Base Counts Overall G 7821449946 24.22 %
Base Counts Overall T 14393773458 44.58 %
Base Counts Overall N 484228240 1.50 %



Bisulfite Conversion Rate

Bisulfite Conversion Type Conversion Rate
Conversion Rate 0.9940165030202994
Over Conversion Rate NA



Mapping Quality

Mapping Quality Histogram
SRX043406_16_lanes.mapq.png



Read Length

Read Length Reads
42 206502059
84 30233958
85 215766735
82 27508193