/CEMT/methylation/A50423_A50425_4_lane_gembs
BACK
SAMPLE A50423_A50425_4_lane_gembs
CpG counts
| Type |
Total |
Pass |
% |
| RefCpG |
24962779 |
5824365 |
23.33 % |
| NonRefCpG |
471684 |
55254 |
11.71 % |
Coverage CpGs
| Coverage Reference CpGs |
Coverage Information Reads Reference CpGs |
 |
 |
| Coverage Non Reference CpGs |
Coverage Information Reads Non-Reference CpGs |
 |
 |
Quality CpGs
| Genotype Quality Phred scaled Reference CpGs |
Genotype Quality Phred scaled Non-Reference CpGs |
 |
 |
Methylation CpGs
| CpGs Methylation Distribution |
 |
CpG Methylation Profile (From Individual Strands)
| Type |
#AllReferenceCpG |
% |
#PassedReferenceCpG |
% |
#AllNonReferenceCpG |
% |
#PassedNonReferenceCpG |
% |
| Unmethylated (0-0.3) |
4116202 |
10.08 % |
392254 |
3.23 % |
247342 |
31.31 % |
19675 |
12.30 % |
| Intermediate (0.3-0.7) |
11184461 |
27.40 % |
1999150 |
16.44 % |
233749 |
29.59 % |
33293 |
20.81 % |
| Methylated (0.7-1) |
25519665 |
62.52 % |
9766843 |
80.33 % |
308889 |
39.10 % |
107020 |
66.89 % |
| |
|
|
|
|
|
|
|
|
| Median Methylation |
0.790 |
|
0.880 |
|
0.560 |
|
0.830 |
|