/cemt/A54774_3_lane_gembs/C7NH5ANXX_2_1
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 543108218 | 100.00 % | 271554109 | 100.00 % | 271554109 | 100.00 % |
| General Reads | 517111500 | 95.21 % | 258808300 | 95.31 % | 258303200 | 95.12 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 16958574 | 3.12 % | 8481667 | 3.12 % | 8476907 | 3.12 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 9038144 | 1.66 % | 4264142 | 1.57 % | 4774002 | 1.76 % |
| Bisulfite_reads C2T | 273352207 | 50.33 % | 136800929 | 50.38 % | 136551278 | 50.29 % |
| Bisulfite_reads G2A | 260717867 | 48.00 % | 130489038 | 48.05 % | 130228829 | 47.96 % |
| Concept | Value |
|---|---|
| Unique Fragments | 198083949 |
| Average Unique | 72.94 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 26972642183 | 39.42 % | 12688368284 | 37.08 % | 14284273899 | 41.75 % |
| Base Counts Overall C | 7045896715 | 10.30 % | 355071024 | 1.04 % | 6690825691 | 19.55 % |
| Base Counts Overall G | 7276203719 | 10.63 % | 6798043560 | 19.87 % | 478160159 | 1.40 % |
| Base Counts Overall T | 26589723677 | 38.86 % | 14098792681 | 41.21 % | 12490930996 | 36.51 % |
| Base Counts Overall N | 547169174 | 0.80 % | 275542185 | 0.81 % | 271626989 | 0.79 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | 0.9891750777544794 |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 228403998 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 125 | 271554109 |
| 125 | 271554109 |
| Insert Size Histogram |
|---|
 |