/cemt/A54774_3_lane_gembs/C7NH5ANXX_3_1
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 543521360 | 100.00 % | 271760680 | 100.00 % | 271760680 | 100.00 % |
| General Reads | 517484367 | 95.21 % | 258999198 | 95.30 % | 258485169 | 95.11 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 16960146 | 3.12 % | 8482921 | 3.12 % | 8477225 | 3.12 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 9076847 | 1.67 % | 4278561 | 1.57 % | 4798286 | 1.77 % |
| Bisulfite_reads C2T | 273539425 | 50.33 % | 136898551 | 50.37 % | 136640874 | 50.28 % |
| Bisulfite_reads G2A | 260905088 | 48.00 % | 130583568 | 48.05 % | 130321520 | 47.95 % |
| Concept | Value |
|---|---|
| Unique Fragments | 198208592 |
| Average Unique | 72.93 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 26992409755 | 39.41 % | 12697344848 | 37.08 % | 14295064907 | 41.75 % |
| Base Counts Overall C | 7049612143 | 10.29 % | 355004465 | 1.04 % | 6694607678 | 19.55 % |
| Base Counts Overall G | 7281629122 | 10.63 % | 6804148629 | 19.87 % | 477480493 | 1.39 % |
| Base Counts Overall T | 26611704302 | 38.86 % | 14108983605 | 41.20 % | 12502720697 | 36.51 % |
| Base Counts Overall N | 548336038 | 0.80 % | 276364133 | 0.81 % | 271971905 | 0.79 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | 0.9892033056648037 |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 228573058 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 125 | 271760680 |
| 125 | 271760680 |
| Insert Size Histogram |
|---|
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