/cemt/A54763_3_lane_gembs

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SAMPLE A54763_3_lane_gembs




Mapping Stats (Reads)

Concept Total Reads % Pair One Reads % Pair Two Reads %
Sequenced Reads 1358488396 100.00 % 679244198 100.00 % 679244198 100.00 %
General Reads 1290841503 95.02 % 646742585 95.22 % 644098918 94.83 %
Reads in Control sequences 0 0.00 % 0 0.00 % 0 0.00 %
Reads under conversion control 46527033 3.42 % 23314197 3.43 % 23212836 3.42 %
Reads over conversion control 0 0.00 % 0 0.00 % 0 0.00 %
Unmapped reads 21119860 1.55 % 9187416 1.35 % 11932444 1.76 %
Bisulfite_reads C2T 687868680 50.63 % 344597669 50.73 % 343271011 50.54 %
Bisulfite_reads G2A 649499856 47.81 % 325459113 47.91 % 324040743 47.71 %



Uniqueness (Fragments)

Concept Value
Unique Fragments 470642191
Average Unique 69.29 %



Mapping Stats (Bases)

Concept Total Bases % Pair One Bases % Pair Two Bases %
Base Counts Overall A 67269025990 39.30 % 31486018909 36.79 % 35783007081 41.81 %
Base Counts Overall C 17913272037 10.47 % 884387654 1.03 % 17028884383 19.90 %
Base Counts Overall G 18704592429 10.93 % 17454020525 20.39 % 1250571904 1.46 %
Base Counts Overall T 65876693775 38.49 % 35066706218 40.97 % 30809987557 36.00 %
Base Counts Overall N 1405953665 0.82 % 693635642 0.81 % 712318023 0.83 %



Bisulfite Conversion Rate

Bisulfite Conversion Type Conversion Rate
Conversion Rate 0.9916802123639101
Over Conversion Rate NA



Correct Pairs

Concept Total Reads
Correct Pairs 546877918



Mapping Quality

Mapping Quality Histogram
A54763_3_lane_gembs.mapq.png



Insert Size Plot

Insert Size Histogram
A54763_3_lane_gembs.isize.png



Mapping Lanes Reports

LANE REPORTS
C7NYNANXX_3_1
C7NYNANXX_4_1
C7NH9ANXX_4_1