/cemt/A54773_3_lane_gembs/C7HT9ANXX_1_1
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 445831986 | 100.00 % | 222915993 | 100.00 % | 222915993 | 100.00 % |
| General Reads | 420814657 | 94.39 % | 210747266 | 94.54 % | 210067391 | 94.24 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 17532051 | 3.93 % | 8779200 | 3.94 % | 8752851 | 3.93 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 7485278 | 1.68 % | 3389527 | 1.52 % | 4095751 | 1.84 % |
| Bisulfite_reads C2T | 224302256 | 50.31 % | 112334870 | 50.39 % | 111967386 | 50.23 % |
| Bisulfite_reads G2A | 214044452 | 48.01 % | 107191596 | 48.09 % | 106852856 | 47.93 % |
| Concept | Value |
|---|---|
| Unique Fragments | 157441930 |
| Average Unique | 70.63 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 22057131844 | 39.27 % | 10099314631 | 35.96 % | 11957817213 | 42.57 % |
| Base Counts Overall C | 5890135167 | 10.49 % | 316479601 | 1.13 % | 5573655566 | 19.84 % |
| Base Counts Overall G | 6187826547 | 11.02 % | 5724936686 | 20.38 % | 462889861 | 1.65 % |
| Base Counts Overall T | 21583044364 | 38.42 % | 11716673135 | 41.72 % | 9866371229 | 35.13 % |
| Base Counts Overall N | 456692314 | 0.81 % | 230011065 | 0.82 % | 226681249 | 0.81 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | 0.9881454559753123 |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 181572033 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 125 | 222915993 |
| 125 | 222915993 |
| Insert Size Histogram |
|---|
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