/cemt/A54773_3_lane_gembs/C7NH5ANXX_1_1
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 491745584 | 100.00 % | 245872792 | 100.00 % | 245872792 | 100.00 % |
| General Reads | 464439318 | 94.45 % | 232440659 | 94.54 % | 231998659 | 94.36 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 19140257 | 3.89 % | 9575771 | 3.89 % | 9564486 | 3.89 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 8166009 | 1.66 % | 3856362 | 1.57 % | 4309647 | 1.75 % |
| Bisulfite_reads C2T | 247401879 | 50.31 % | 123813041 | 50.36 % | 123588838 | 50.27 % |
| Bisulfite_reads G2A | 236177696 | 48.03 % | 118203389 | 48.08 % | 117974307 | 47.98 % |
| Concept | Value |
|---|---|
| Unique Fragments | 173809873 |
| Average Unique | 70.69 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 24324976960 | 39.26 % | 11162397456 | 36.03 % | 13162579504 | 42.49 % |
| Base Counts Overall C | 6477167892 | 10.45 % | 344629363 | 1.11 % | 6132538529 | 19.80 % |
| Base Counts Overall G | 6766388244 | 10.92 % | 6273133051 | 20.25 % | 493255193 | 1.59 % |
| Base Counts Overall T | 23889290701 | 38.56 % | 12947262945 | 41.79 % | 10942027756 | 35.32 % |
| Base Counts Overall N | 502119787 | 0.81 % | 252548977 | 0.82 % | 249570810 | 0.81 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | 0.9890974968876753 |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 200491338 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 125 | 245872792 |
| 125 | 245872792 |
| Insert Size Histogram |
|---|
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