/EXTERNAL Roadmap/K006530_K006531_2_lane_gembs/SRX175348_13_lanes

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SAMPLE K006530_K006531_2_lane_gembs LANE SRX175348_13_lanes

Mapping Stats (Reads)

Concept Total Reads % Pair One Reads % Pair Two Reads %
Sequenced Reads 2961325903 100.00 % 2961325903 100.00 % 0 0.00 %
General Reads 2902158819 98.00 % 2902158819 98.00 % 0 0.00 %
Reads in Control sequences 0 0.00 % 0 0.00 % 0 0.00 %
Reads under conversion control 10669322 0.36 % 10669322 0.36 % 0 0.00 %
Reads over conversion control 0 0.00 % 0 0.00 % 0 0.00 %
Unmapped reads 48497762 1.64 % 48497762 1.64 % 0 0.00 %
Bisulfite_reads C2T 1483714376 50.10 % 1483714376 50.10 % 0 0.00 %
Bisulfite_reads G2A 1429113765 48.26 % 1429113765 48.26 % 0 0.00 %



Uniqueness (Fragments)

Concept Value
Unique Fragments 2467499161
Average Unique 84.71 %



Mapping Stats (Bases)

Concept Total Bases % Pair One Bases % Pair Two Bases %
Base Counts Overall A 90471089730 30.16 %
Base Counts Overall C 2958614559 0.99 %
Base Counts Overall G 67082778554 22.36 %
Base Counts Overall T 136398325730 45.46 %
Base Counts Overall N 3107941678 1.04 %



Bisulfite Conversion Rate

Bisulfite Conversion Type Conversion Rate
Conversion Rate 0.996064002060809
Over Conversion Rate NA



Mapping Quality

Mapping Quality Histogram
SRX175348_13_lanes.mapq.png



Read Length

Read Length Reads
100 2036491855
101 924834048