/EXTERNAL Roadmap/K006534_1_lane_gembs/SRX175352_13_lanes

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SAMPLE K006534_1_lane_gembs LANE SRX175352_13_lanes

Mapping Stats (Reads)

Concept Total Reads % Pair One Reads % Pair Two Reads %
Sequenced Reads 2843089608 100.00 % 2843089608 100.00 % 0 0.00 %
General Reads 2744453777 96.53 % 2744453777 96.53 % 0 0.00 %
Reads in Control sequences 0 0.00 % 0 0.00 % 0 0.00 %
Reads under conversion control 9681366 0.34 % 9681366 0.34 % 0 0.00 %
Reads over conversion control 0 0.00 % 0 0.00 % 0 0.00 %
Unmapped reads 88954465 3.13 % 88954465 3.13 % 0 0.00 %
Bisulfite_reads C2T 1397546636 49.16 % 1397546636 49.16 % 0 0.00 %
Bisulfite_reads G2A 1356588507 47.72 % 1356588507 47.72 % 0 0.00 %



Uniqueness (Fragments)

Concept Value
Unique Fragments 2354025340
Average Unique 85.47 %



Mapping Stats (Bases)

Concept Total Bases % Pair One Bases % Pair Two Bases %
Base Counts Overall A 86630048155 30.06 %
Base Counts Overall C 2761710853 0.96 %
Base Counts Overall G 63484926277 22.03 %
Base Counts Overall T 131860593839 45.75 %
Base Counts Overall N 3466549454 1.20 %



Bisulfite Conversion Rate

Bisulfite Conversion Type Conversion Rate
Conversion Rate 0.9960232235420806
Over Conversion Rate NA



Mapping Quality

Mapping Quality Histogram
SRX175352_13_lanes.mapq.png



Read Length

Read Length Reads
101 1051778170
100 1791311438