/EXTERNAL Roadmap/K006552_K006553_K006554_K006555_K006556_K006557_K006558_7_lane_gembs/SRX006783_36_lanes

BACK

SAMPLE K006552_K006553_K006554_K006555_K006556_K006557_K006558_7_lane_gembs LANE SRX006783_36_lanes

Mapping Stats (Reads)

Concept Total Reads % Pair One Reads % Pair Two Reads %
Sequenced Reads 574030598 100.00 % 574030598 100.00 % 0 0.00 %
General Reads 429958950 74.90 % 429958950 74.90 % 0 0.00 %
Reads in Control sequences 0 0.00 % 0 0.00 % 0 0.00 %
Reads under conversion control 980064 0.17 % 980064 0.17 % 0 0.00 %
Reads over conversion control 0 0.00 % 0 0.00 % 0 0.00 %
Unmapped reads 143091584 24.93 % 143091584 24.93 % 0 0.00 %
Bisulfite_reads C2T 217486104 37.89 % 217486104 37.89 % 0 0.00 %
Bisulfite_reads G2A 213452910 37.18 % 213452910 37.18 % 0 0.00 %



Uniqueness (Fragments)

Concept Value
Unique Fragments 309809142
Average Unique 71.89 %



Mapping Stats (Bases)

Concept Total Bases % Pair One Bases % Pair Two Bases %
Base Counts Overall A 14634182031 29.14 %
Base Counts Overall C 1306047027 2.60 %
Base Counts Overall G 11627468387 23.16 %
Base Counts Overall T 21174962195 42.17 %
Base Counts Overall N 1472828960 2.93 %



Bisulfite Conversion Rate

Bisulfite Conversion Type Conversion Rate
Conversion Rate 0.9201927434609167
Over Conversion Rate NA



Mapping Quality

Mapping Quality Histogram
SRX006783_36_lanes.mapq.png



Read Length

Read Length Reads
87 424428586
85 149602012