/EXTERNAL Roadmap/K006552_K006553_K006554_K006555_K006556_K006557_K006558_7_lane_gembs/SRX006784_38_lanes

BACK

SAMPLE K006552_K006553_K006554_K006555_K006556_K006557_K006558_7_lane_gembs LANE SRX006784_38_lanes

Mapping Stats (Reads)

Concept Total Reads % Pair One Reads % Pair Two Reads %
Sequenced Reads 640241557 100.00 % 640241557 100.00 % 0 0.00 %
General Reads 429402949 67.07 % 429402949 67.07 % 0 0.00 %
Reads in Control sequences 0 0.00 % 0 0.00 % 0 0.00 %
Reads under conversion control 917035 0.14 % 917035 0.14 % 0 0.00 %
Reads over conversion control 0 0.00 % 0 0.00 % 0 0.00 %
Unmapped reads 209921573 32.79 % 209921573 32.79 % 0 0.00 %
Bisulfite_reads C2T 210200817 32.83 % 210200817 32.83 % 0 0.00 %
Bisulfite_reads G2A 220119167 34.38 % 220119167 34.38 % 0 0.00 %



Uniqueness (Fragments)

Concept Value
Unique Fragments 296389957
Average Unique 68.88 %



Mapping Stats (Bases)

Concept Total Bases % Pair One Bases % Pair Two Bases %
Base Counts Overall A 14463463117 25.74 %
Base Counts Overall C 1244969108 2.22 %
Base Counts Overall G 11587273134 20.62 %
Base Counts Overall T 20160746983 35.87 %
Base Counts Overall N 8744188374 15.56 %



Bisulfite Conversion Rate

Bisulfite Conversion Type Conversion Rate
Conversion Rate 0.9184413444446389
Over Conversion Rate NA



Mapping Quality

Mapping Quality Histogram
SRX006784_38_lanes.mapq.png



Read Length

Read Length Reads
87 499625257
86 140616300