/EXTERNAL Roadmap/K006552_K006553_K006554_K006555_K006556_K006557_K006558_7_lane_gembs/SRX006785_11_lanes

BACK

SAMPLE K006552_K006553_K006554_K006555_K006556_K006557_K006558_7_lane_gembs LANE SRX006785_11_lanes

Mapping Stats (Reads)

Concept Total Reads % Pair One Reads % Pair Two Reads %
Sequenced Reads 122570931 100.00 % 122570931 100.00 % 0 0.00 %
General Reads 108277670 88.34 % 108277670 88.34 % 0 0.00 %
Reads in Control sequences 0 0.00 % 0 0.00 % 0 0.00 %
Reads under conversion control 249951 0.20 % 249951 0.20 % 0 0.00 %
Reads over conversion control 0 0.00 % 0 0.00 % 0 0.00 %
Unmapped reads 14043310 11.46 % 14043310 11.46 % 0 0.00 %
Bisulfite_reads C2T 54797955 44.71 % 54797955 44.71 % 0 0.00 %
Bisulfite_reads G2A 53729666 43.84 % 53729666 43.84 % 0 0.00 %



Uniqueness (Fragments)

Concept Value
Unique Fragments 81156544
Average Unique 74.78 %



Mapping Stats (Bases)

Concept Total Bases % Pair One Bases % Pair Two Bases %
Base Counts Overall A 3215208440 29.92 %
Base Counts Overall C 306236519 2.85 %
Base Counts Overall G 2498786763 23.26 %
Base Counts Overall T 4503653155 41.91 %
Base Counts Overall N 221216630 2.06 %



Bisulfite Conversion Rate

Bisulfite Conversion Type Conversion Rate
Conversion Rate 0.9063832098797433
Over Conversion Rate NA



Mapping Quality

Mapping Quality Histogram
SRX006785_11_lanes.mapq.png



Read Length

Read Length Reads
87 81430510
86 41140421