/EXTERNAL Roadmap/K006552_K006553_K006554_K006555_K006556_K006557_K006558_7_lane_gembs/SRX006786_34_lanes

BACK

SAMPLE K006552_K006553_K006554_K006555_K006556_K006557_K006558_7_lane_gembs LANE SRX006786_34_lanes

Mapping Stats (Reads)

Concept Total Reads % Pair One Reads % Pair Two Reads %
Sequenced Reads 613987118 100.00 % 613987118 100.00 % 0 0.00 %
General Reads 432002342 70.36 % 432002342 70.36 % 0 0.00 %
Reads in Control sequences 0 0.00 % 0 0.00 % 0 0.00 %
Reads under conversion control 1005265 0.16 % 1005265 0.16 % 0 0.00 %
Reads over conversion control 0 0.00 % 0 0.00 % 0 0.00 %
Unmapped reads 180979511 29.48 % 180979511 29.48 % 0 0.00 %
Bisulfite_reads C2T 218543478 35.59 % 218543478 35.59 % 0 0.00 %
Bisulfite_reads G2A 214464129 34.93 % 214464129 34.93 % 0 0.00 %



Uniqueness (Fragments)

Concept Value
Unique Fragments 302304190
Average Unique 69.81 %



Mapping Stats (Bases)

Concept Total Bases % Pair One Bases % Pair Two Bases %
Base Counts Overall A 15141436635 28.02 %
Base Counts Overall C 1226462865 2.27 %
Base Counts Overall G 12572355645 23.27 %
Base Counts Overall T 20624800674 38.17 %
Base Counts Overall N 4465810565 8.27 %



Bisulfite Conversion Rate

Bisulfite Conversion Type Conversion Rate
Conversion Rate 0.9223004929669607
Over Conversion Rate NA



Mapping Quality

Mapping Quality Histogram
SRX006786_34_lanes.mapq.png



Read Length

Read Length Reads
87 613987118