/EXTERNAL Roadmap/K006552_K006553_K006554_K006555_K006556_K006557_K006558_7_lane_gembs/SRX006787_37_lanes

BACK

SAMPLE K006552_K006553_K006554_K006555_K006556_K006557_K006558_7_lane_gembs LANE SRX006787_37_lanes

Mapping Stats (Reads)

Concept Total Reads % Pair One Reads % Pair Two Reads %
Sequenced Reads 697122584 100.00 % 697122584 100.00 % 0 0.00 %
General Reads 498824461 71.55 % 498824461 71.55 % 0 0.00 %
Reads in Control sequences 0 0.00 % 0 0.00 % 0 0.00 %
Reads under conversion control 1174717 0.17 % 1174717 0.17 % 0 0.00 %
Reads over conversion control 0 0.00 % 0 0.00 % 0 0.00 %
Unmapped reads 197123406 28.28 % 197123406 28.28 % 0 0.00 %
Bisulfite_reads C2T 252875615 36.27 % 252875615 36.27 % 0 0.00 %
Bisulfite_reads G2A 247123563 35.45 % 247123563 35.45 % 0 0.00 %



Uniqueness (Fragments)

Concept Value
Unique Fragments 344512451
Average Unique 68.90 %



Mapping Stats (Bases)

Concept Total Bases % Pair One Bases % Pair Two Bases %
Base Counts Overall A 17847922875 29.17 %
Base Counts Overall C 1394631745 2.28 %
Base Counts Overall G 14774470480 24.15 %
Base Counts Overall T 23503760245 38.41 %
Base Counts Overall N 3665879859 5.99 %



Bisulfite Conversion Rate

Bisulfite Conversion Type Conversion Rate
Conversion Rate 0.92471425053098
Over Conversion Rate NA



Mapping Quality

Mapping Quality Histogram
SRX006787_37_lanes.mapq.png



Read Length

Read Length Reads
87 537000396
86 160122188