/EXTERNAL Roadmap/K006552_K006553_K006554_K006555_K006556_K006557_K006558_7_lane_gembs/SRX006788_12_lanes

BACK

SAMPLE K006552_K006553_K006554_K006555_K006556_K006557_K006558_7_lane_gembs LANE SRX006788_12_lanes

Mapping Stats (Reads)

Concept Total Reads % Pair One Reads % Pair Two Reads %
Sequenced Reads 169696241 100.00 % 169696241 100.00 % 0 0.00 %
General Reads 144092432 84.91 % 144092432 84.91 % 0 0.00 %
Reads in Control sequences 0 0.00 % 0 0.00 % 0 0.00 %
Reads under conversion control 336058 0.20 % 336058 0.20 % 0 0.00 %
Reads over conversion control 0 0.00 % 0 0.00 % 0 0.00 %
Unmapped reads 25267751 14.89 % 25267751 14.89 % 0 0.00 %
Bisulfite_reads C2T 72882558 42.95 % 72882558 42.95 % 0 0.00 %
Bisulfite_reads G2A 71545932 42.16 % 71545932 42.16 % 0 0.00 %



Uniqueness (Fragments)

Concept Value
Unique Fragments 106342035
Average Unique 73.63 %



Mapping Stats (Bases)

Concept Total Bases % Pair One Bases % Pair Two Bases %
Base Counts Overall A 4420263708 29.72 %
Base Counts Overall C 404369528 2.72 %
Base Counts Overall G 3587856728 24.12 %
Base Counts Overall T 6117826567 41.13 %
Base Counts Overall N 343000021 2.31 %



Bisulfite Conversion Rate

Bisulfite Conversion Type Conversion Rate
Conversion Rate 0.9134619656365173
Over Conversion Rate NA



Mapping Quality

Mapping Quality Histogram
SRX006788_12_lanes.mapq.png



Read Length

Read Length Reads
87 109743585
86 59952656