/EXTERNAL Roadmap/K006552_K006553_K006554_K006555_K006556_K006557_K006558_7_lane_gembs/SRX323155_3_lanes
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 426265200 | 100.00 % | 213132600 | 100.00 % | 213132600 | 100.00 % |
| General Reads | 420344808 | 98.61 % | 210378383 | 98.71 % | 209966425 | 98.51 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 5920392 | 1.39 % | 2754217 | 1.29 % | 3166175 | 1.49 % |
| Bisulfite_reads C2T | 217292900 | 50.98 % | 108746557 | 51.02 % | 108546343 | 50.93 % |
| Bisulfite_reads G2A | 203051908 | 47.64 % | 101631826 | 47.68 % | 101420082 | 47.59 % |
| Concept | Value |
|---|---|
| Unique Fragments | 149622592 |
| Average Unique | 70.20 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 15252477012 | 35.43 % | 5859515999 | 27.49 % | 9392961013 | 43.21 % |
| Base Counts Overall C | 6092948953 | 14.15 % | 347133065 | 1.63 % | 5745815888 | 26.43 % |
| Base Counts Overall G | 6284544121 | 14.60 % | 5846193936 | 27.43 % | 438350185 | 2.02 % |
| Base Counts Overall T | 14967595554 | 34.77 % | 9039910419 | 42.41 % | 5927685135 | 27.27 % |
| Base Counts Overall N | 455219560 | 1.06 % | 220506581 | 1.03 % | 234712979 | 1.08 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | NA |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 188005305 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 99 | 213132600 |
| 101 | 213132600 |
| Insert Size Histogram |
|---|
 |