/EXTERNAL Roadmap/K006559_K006560_K006561_K006562_K006563_5_lane_gembs/SRX006240_42_lanes

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SAMPLE K006559_K006560_K006561_K006562_K006563_5_lane_gembs LANE SRX006240_42_lanes

Mapping Stats (Reads)

Concept	Total Reads	%	Pair One Reads	%	Pair Two Reads	%
Sequenced Reads	544393574	100.00 %	544393574	100.00 %	0	0.00 %
General Reads	395398501	72.63 %	395398501	72.63 %	0	0.00 %
Reads in Control sequences	0	0.00 %	0	0.00 %	0	0.00 %
Reads under conversion control	978194	0.18 %	978194	0.18 %	0	0.00 %
Reads over conversion control	0	0.00 %	0	0.00 %	0	0.00 %
Unmapped reads	148016879	27.19 %	148016879	27.19 %	0	0.00 %
Bisulfite_reads C2T	200889318	36.90 %	200889318	36.90 %	0	0.00 %
Bisulfite_reads G2A	195487377	35.91 %	195487377	35.91 %	0	0.00 %

Uniqueness (Fragments)

Concept	Value
Unique Fragments	286331195
Average Unique	72.24 %

Mapping Stats (Bases)

Concept	Total Bases	%	Pair One Bases	%	Pair Two Bases	%
Base Counts Overall A	13922006663	29.06 %
Base Counts Overall C	1416583722	2.96 %
Base Counts Overall G	11915757076	24.87 %
Base Counts Overall T	19749122533	41.22 %
Base Counts Overall N	903164518	1.89 %

Bisulfite Conversion Rate

Bisulfite Conversion Type	Conversion Rate
Conversion Rate	0.9167083572142963
Over Conversion Rate	NA

Mapping Quality

Mapping Quality Histogram

Read Length

Read Length	Reads
87	544393574