/EXTERNAL Roadmap/K006559_K006560_K006561_K006562_K006563_5_lane_gembs/SRX006241_2_lanes

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SAMPLE K006559_K006560_K006561_K006562_K006563_5_lane_gembs LANE SRX006241_2_lanes

Mapping Stats (Reads)

Concept	Total Reads	%	Pair One Reads	%	Pair Two Reads	%
Sequenced Reads	4090622	100.00 %	4090622	100.00 %	0	0.00 %
General Reads	3460351	84.59 %	3460351	84.59 %	0	0.00 %
Reads in Control sequences	0	0.00 %	0	0.00 %	0	0.00 %
Reads under conversion control	7807	0.19 %	7807	0.19 %	0	0.00 %
Reads over conversion control	0	0.00 %	0	0.00 %	0	0.00 %
Unmapped reads	622464	15.22 %	622464	15.22 %	0	0.00 %
Bisulfite_reads C2T	1709114	41.78 %	1709114	41.78 %	0	0.00 %
Bisulfite_reads G2A	1759044	43.00 %	1759044	43.00 %	0	0.00 %

Uniqueness (Fragments)

Concept	Value
Unique Fragments	2469406
Average Unique	71.20 %

Mapping Stats (Bases)

Concept	Total Bases	%	Pair One Bases	%	Pair Two Bases	%
Base Counts Overall A	128295021	35.64 %
Base Counts Overall C	20911989	5.81 %
Base Counts Overall G	75560260	20.99 %
Base Counts Overall T	127687043	35.47 %
Base Counts Overall N	7520423	2.09 %

Bisulfite Conversion Rate

Bisulfite Conversion Type	Conversion Rate
Conversion Rate	0.9258958079666916
Over Conversion Rate	NA

Mapping Quality

Mapping Quality Histogram

Read Length

Read Length	Reads
87	4090622