/cemt/A59692_3_lane_gembs

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SAMPLE A59692_3_lane_gembs




Mapping Stats (Reads)

Concept Total Reads % Pair One Reads % Pair Two Reads %
Sequenced Reads 1457083624 100.00 % 728541812 100.00 % 728541812 100.00 %
General Reads 1437082383 98.63 % 720610223 98.91 % 716472160 98.34 %
Reads in Control sequences 0 0.00 % 0 0.00 % 0 0.00 %
Reads under conversion control 1812592 0.12 % 907992 0.12 % 904600 0.12 %
Reads over conversion control 0 0.00 % 0 0.00 % 0 0.00 %
Unmapped reads 18188649 1.25 % 7023597 0.96 % 11165052 1.53 %
Bisulfite_reads C2T 735168763 50.45 % 368611240 50.60 % 366557523 50.31 %
Bisulfite_reads G2A 703726212 48.30 % 352906975 48.44 % 350819237 48.15 %



Uniqueness (Fragments)

Concept Value
Unique Fragments 615347845
Average Unique 84.46 %



Mapping Stats (Bases)

Concept Total Bases % Pair One Bases % Pair Two Bases %
Base Counts Overall A 72316781409 39.39 % 28804616030 31.38 % 43512165379 47.40 %
Base Counts Overall C 18631718442 10.15 % 646503581 0.70 % 17985214861 19.59 %
Base Counts Overall G 18453092906 10.05 % 17853387919 19.45 % 599704987 0.65 %
Base Counts Overall T 72560003588 39.52 % 43722243658 47.63 % 28837759930 31.41 %
Base Counts Overall N 1630940279 0.89 % 769517124 0.84 % 861423155 0.94 %



Bisulfite Conversion Rate

Bisulfite Conversion Type Conversion Rate
Conversion Rate 0.9964500025710391
Over Conversion Rate NA



Correct Pairs

Concept Total Reads
Correct Pairs 697250633



Mapping Quality

Mapping Quality Histogram
A59692_3_lane_gembs.mapq.png



Insert Size Plot

Insert Size Histogram
A59692_3_lane_gembs.isize.png



Mapping Lanes Reports

LANE REPORTS
C907DANXX_1_1
C8W89ANXX_3_1
C8W89ANXX_4_1