/cemt/A59692_3_lane_gembs/C8W89ANXX_3_1
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 509957290 | 100.00 % | 254978645 | 100.00 % | 254978645 | 100.00 % |
| General Reads | 502913738 | 98.62 % | 252149475 | 98.89 % | 250764263 | 98.35 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 636824 | 0.12 % | 318908 | 0.13 % | 317916 | 0.12 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 6406728 | 1.26 % | 2510262 | 0.98 % | 3896466 | 1.53 % |
| Bisulfite_reads C2T | 257283044 | 50.45 % | 128987877 | 50.59 % | 128295167 | 50.32 % |
| Bisulfite_reads G2A | 246267518 | 48.29 % | 123480506 | 48.43 % | 122787012 | 48.16 % |
| Concept | Value |
|---|---|
| Unique Fragments | 215298196 |
| Average Unique | 84.44 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 25313619369 | 39.40 % | 10072252219 | 31.35 % | 15241367150 | 47.44 % |
| Base Counts Overall C | 6529549014 | 10.16 % | 229915697 | 0.72 % | 6299633317 | 19.61 % |
| Base Counts Overall G | 6456753156 | 10.05 % | 6245533612 | 19.44 % | 211219544 | 0.66 % |
| Base Counts Overall T | 25406875622 | 39.54 % | 15312903999 | 47.66 % | 10093971623 | 31.42 % |
| Base Counts Overall N | 547821379 | 0.85 % | 266703743 | 0.83 % | 281117636 | 0.88 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | 0.9962851737599175 |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 243961917 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 125 | 254978645 |
| 125 | 254978645 |
| Insert Size Histogram |
|---|
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