/cemt/A59692_3_lane_gembs/C907DANXX_1_1

BACK

SAMPLE A59692_3_lane_gembs LANE C907DANXX_1_1

Mapping Stats (Reads)

Concept Total Reads % Pair One Reads % Pair Two Reads %
Sequenced Reads 438324078 100.00 % 219162039 100.00 % 219162039 100.00 %
General Reads 432576913 98.69 % 216984040 99.01 % 215592873 98.37 %
Reads in Control sequences 0 0.00 % 0 0.00 % 0 0.00 %
Reads under conversion control 542025 0.12 % 271644 0.12 % 270381 0.12 %
Reads over conversion control 0 0.00 % 0 0.00 % 0 0.00 %
Unmapped reads 5205140 1.19 % 1906355 0.87 % 3298785 1.51 %
Bisulfite_reads C2T 221306601 50.49 % 110996557 50.65 % 110310044 50.33 %
Bisulfite_reads G2A 211812337 48.32 % 106259127 48.48 % 105553210 48.16 %



Uniqueness (Fragments)

Concept Value
Unique Fragments 185435928
Average Unique 84.61 %



Mapping Stats (Bases)

Concept Total Bases % Pair One Bases % Pair Two Bases %
Base Counts Overall A 21747637437 39.38 % 8681140019 31.44 % 13066497418 47.32 %
Base Counts Overall C 5587976843 10.12 % 185553387 0.67 % 5402423456 19.56 %
Base Counts Overall G 5554291943 10.06 % 5376247870 19.47 % 178044073 0.64 %
Base Counts Overall T 21811705478 39.49 % 13137665133 47.58 % 8674040345 31.41 %
Base Counts Overall N 527222127 0.95 % 233810505 0.85 % 293411622 1.06 %



Bisulfite Conversion Rate

Bisulfite Conversion Type Conversion Rate
Conversion Rate 0.9967074965935797
Over Conversion Rate NA



Correct Pairs

Concept Total Reads
Correct Pairs 210082665



Mapping Quality

Mapping Quality Histogram
C907DANXX_1_1.mapq.png



Read Length

Read Length Reads
125 219162039
125 219162039



Insert Size Plot

Insert Size Histogram
C907DANXX_1_1.isize.png