/cemt/A59694_3_lane_gembs/C8W89ANXX_7_1
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 494543158 | 100.00 % | 247271579 | 100.00 % | 247271579 | 100.00 % |
| General Reads | 488658986 | 98.81 % | 245063408 | 99.11 % | 243595578 | 98.51 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 735132 | 0.15 % | 368272 | 0.15 % | 366860 | 0.15 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 5149040 | 1.04 % | 1839899 | 0.74 % | 3309141 | 1.34 % |
| Bisulfite_reads C2T | 249135887 | 50.38 % | 124923625 | 50.52 % | 124212262 | 50.23 % |
| Bisulfite_reads G2A | 240258231 | 48.58 % | 120508055 | 48.74 % | 119750176 | 48.43 % |
| Concept | Value |
|---|---|
| Unique Fragments | 212001307 |
| Average Unique | 85.74 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 24517606729 | 39.35 % | 9749117812 | 31.29 % | 14768488917 | 47.40 % |
| Base Counts Overall C | 6354392091 | 10.20 % | 234172543 | 0.75 % | 6120219548 | 19.64 % |
| Base Counts Overall G | 6288902026 | 10.09 % | 6067141445 | 19.47 % | 221760581 | 0.71 % |
| Base Counts Overall T | 24606114324 | 39.49 % | 14847228303 | 47.65 % | 9758886021 | 31.32 % |
| Base Counts Overall N | 545422738 | 0.88 % | 258558851 | 0.83 % | 286863887 | 0.92 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | 0.9965131203592714 |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 237647365 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 125 | 247271579 |
| 125 | 247271579 |
| Insert Size Histogram |
|---|
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