/EXTERNAL BLUEPRINT/K006389_K006402_19_lane_gembs
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 2041727526 | 100.00 % | 1020863763 | 100.00 % | 1020863763 | 100.00 % |
| General Reads | 1971258321 | 96.55 % | 988779205 | 96.86 % | 982479116 | 96.24 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 28384403 | 1.39 % | 14225110 | 1.39 % | 14159293 | 1.39 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 42084802 | 2.06 % | 17859448 | 1.75 % | 24225354 | 2.37 % |
| Bisulfite_reads C2T | 1037837894 | 50.83 % | 520573326 | 50.99 % | 517264568 | 50.67 % |
| Bisulfite_reads G2A | 961804830 | 47.11 % | 482430989 | 47.26 % | 479373841 | 46.96 % |
| Concept | Value |
|---|---|
| Unique Fragments | 828161046 |
| Average Unique | 81.12 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 77350908209 | 37.14 % | 30116267902 | 28.92 % | 47234640307 | 45.36 % |
| Base Counts Overall C | 25854363267 | 12.41 % | 1364905670 | 1.31 % | 24489457597 | 23.52 % |
| Base Counts Overall G | 26083943069 | 12.52 % | 24770707539 | 23.79 % | 1313235530 | 1.26 % |
| Base Counts Overall T | 76855399449 | 36.90 % | 46838214186 | 44.98 % | 30017185263 | 28.83 % |
| Base Counts Overall N | 2111593658 | 1.01 % | 1038008529 | 1.00 % | 1073585129 | 1.03 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | 0.9992396211906055 |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 971450060 |
| Mapping Quality Histogram |
|---|
| |
| Insert Size Histogram |
|---|
 |
| LANE REPORTS |
|---|
| UMCG00014.Bisulfite-Seq.DNA_Methylation.EGAX00001345060_11 |
| UMCG00014.Bisulfite-Seq.DNA_Methylation.EGAX00001345074_8 |