/cemt/K005736_K005719_2_lane_gembs/ENCFF140WEJ_150bp_chastity
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 1524558430 | 100.00 % | 762279215 | 100.00 % | 762279215 | 100.00 % |
| General Reads | 1486234216 | 97.49 % | 752981179 | 98.78 % | 733253037 | 96.19 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 8201438 | 0.54 % | 4148060 | 0.54 % | 4053378 | 0.53 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 30122776 | 1.98 % | 5149976 | 0.68 % | 24972800 | 3.28 % |
| Bisulfite_reads C2T | 758706631 | 49.77 % | 384276791 | 50.41 % | 374429840 | 49.12 % |
| Bisulfite_reads G2A | 735729023 | 48.26 % | 372852448 | 48.91 % | 362876575 | 47.60 % |
| Concept | Value |
|---|---|
| Unique Fragments | 614759850 |
| Average Unique | 80.65 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 88881122647 | 38.61 % | 35190081082 | 30.57 % | 53691041565 | 46.65 % |
| Base Counts Overall C | 23281359964 | 10.11 % | 1519344386 | 1.32 % | 21762015578 | 18.91 % |
| Base Counts Overall G | 25402725252 | 11.03 % | 22393706593 | 19.46 % | 3009018659 | 2.61 % |
| Base Counts Overall T | 91103259427 | 39.57 % | 55235841952 | 47.99 % | 35867417475 | 31.16 % |
| Base Counts Overall N | 1539855640 | 0.67 % | 765187452 | 0.66 % | 774668188 | 0.67 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | 0.969330447639043 |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 682486966 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 150 | 762279215 |
| 150 | 762279215 |
| Insert Size Histogram |
|---|
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