/cemt/K005736_K005719_2_lane_gembs

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SAMPLE K005736_K005719_2_lane_gembs




Mapping Stats (Reads)

Concept Total Reads % Pair One Reads % Pair Two Reads %
Sequenced Reads 2994964180 100.00 % 1497482090 100.00 % 1497482090 100.00 %
General Reads 2900890318 96.86 % 1476605031 98.61 % 1424285287 95.11 %
Reads in Control sequences 0 0.00 % 0 0.00 % 0 0.00 %
Reads under conversion control 14967107 0.50 % 7602099 0.51 % 7365008 0.49 %
Reads over conversion control 0 0.00 % 0 0.00 % 0 0.00 %
Unmapped reads 79106755 2.64 % 13274960 0.89 % 65831795 4.40 %
Bisulfite_reads C2T 1478409891 49.36 % 752277305 50.24 % 726132586 48.49 %
Bisulfite_reads G2A 1437447534 48.00 % 731929825 48.88 % 705517709 47.11 %



Uniqueness (Fragments)

Concept Value
Unique Fragments 1151413453
Average Unique 76.89 %



Mapping Stats (Bases)

Concept Total Bases % Pair One Bases % Pair Two Bases %
Base Counts Overall A 172960294383 38.25 % 68993525329 30.51 % 103966769054 45.98 %
Base Counts Overall C 46676722695 10.32 % 3987277824 1.76 % 42689444871 18.88 %
Base Counts Overall G 51813905455 11.46 % 44022699603 19.47 % 7791205852 3.45 %
Base Counts Overall T 177762780308 39.31 % 107613348512 47.59 % 70149431796 31.02 %
Base Counts Overall N 3025888339 0.67 % 1502944322 0.66 % 1522944017 0.67 %



Bisulfite Conversion Rate

Bisulfite Conversion Type Conversion Rate
Conversion Rate 0.9586035410749858
Over Conversion Rate NA



Correct Pairs

Concept Total Reads
Correct Pairs 1284135346



Mapping Quality

Mapping Quality Histogram
K005736_K005719_2_lane_gembs.mapq.png



Insert Size Plot

Insert Size Histogram
K005736_K005719_2_lane_gembs.isize.png



Mapping Lanes Reports

LANE REPORTS
ENCFF140WEJ_150bp_chastity
ENCFF460PSF_150bp_chastity