/cemt/methylation/K005736_K005719_2_lane_gembs
BACK
SAMPLE K005736_K005719_2_lane_gembs
CpG counts
| Type |
Total |
Pass |
% |
| RefCpG |
27172447 |
25142769 |
92.53 % |
| NonRefCpG |
260551 |
210877 |
80.94 % |
Coverage CpGs
| Coverage Reference CpGs |
Coverage Information Reads Reference CpGs |
 |
 |
| Coverage Non Reference CpGs |
Coverage Information Reads Non-Reference CpGs |
 |
 |
Quality CpGs
| Genotype Quality Phred scaled Reference CpGs |
Genotype Quality Phred scaled Non-Reference CpGs |
 |
 |
Methylation CpGs
| CpGs Methylation Distribution |
 |
CpG Methylation Profile (From Individual Strands)
| Type |
#AllReferenceCpG |
% |
#PassedReferenceCpG |
% |
#AllNonReferenceCpG |
% |
#PassedNonReferenceCpG |
% |
| Unmethylated (0-0.3) |
4710250 |
8.77 % |
3720066 |
7.30 % |
25280 |
5.11 % |
11061 |
2.59 % |
| Intermediate (0.3-0.7) |
6903655 |
12.85 % |
6236539 |
12.23 % |
71669 |
14.49 % |
51390 |
12.01 % |
| Methylated (0.7-1) |
42096466 |
78.38 % |
41035603 |
80.47 % |
397514 |
80.39 % |
365368 |
85.40 % |
| |
|
|
|
|
|
|
|
|
| Median Methylation |
0.880 |
|
0.890 |
|
0.880 |
|
0.890 |
|