/EXTERNAL ENCODE/K005738_K005721_2_lane_gembs/ENCFF142GZA_150bp_chastity
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 2000256276 | 100.00 % | 1000128138 | 100.00 % | 1000128138 | 100.00 % |
| General Reads | 1963263144 | 98.15 % | 985178194 | 98.51 % | 978084950 | 97.80 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 10435429 | 0.52 % | 5238654 | 0.52 % | 5196775 | 0.52 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 26557703 | 1.33 % | 9711290 | 0.97 % | 16846413 | 1.68 % |
| Bisulfite_reads C2T | 1006211500 | 50.30 % | 504750074 | 50.47 % | 501461426 | 50.14 % |
| Bisulfite_reads G2A | 967487073 | 48.37 % | 485666774 | 48.56 % | 481820299 | 48.18 % |
| Concept | Value |
|---|---|
| Unique Fragments | 739791068 |
| Average Unique | 73.97 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 117687533870 | 38.96 % | 48797799061 | 32.31 % | 68889734809 | 45.62 % |
| Base Counts Overall C | 32424946956 | 10.74 % | 1887028318 | 1.25 % | 30537918638 | 20.22 % |
| Base Counts Overall G | 32746606370 | 10.84 % | 30481519513 | 20.18 % | 2265086857 | 1.50 % |
| Base Counts Overall T | 117118903372 | 38.78 % | 68824206161 | 45.57 % | 48294697211 | 31.98 % |
| Base Counts Overall N | 2060707108 | 0.68 % | 1028795785 | 0.68 % | 1031911323 | 0.68 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | 0.9924458987769289 |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 822870077 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 150 | 1000128138 |
| 150 | 1000128138 |
| Insert Size Histogram |
|---|
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