/EXTERNAL ENCODE/K005738_K005721_2_lane_gembs/ENCFF968GRR_150bp_chastity
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 1772887882 | 100.00 % | 886443941 | 100.00 % | 886443941 | 100.00 % |
| General Reads | 1737996176 | 98.03 % | 872415161 | 98.42 % | 865581015 | 97.65 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 12120019 | 0.68 % | 6088534 | 0.69 % | 6031485 | 0.68 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 22771687 | 1.28 % | 7940246 | 0.90 % | 14831441 | 1.67 % |
| Bisulfite_reads C2T | 891821782 | 50.30 % | 447497260 | 50.48 % | 444324522 | 50.12 % |
| Bisulfite_reads G2A | 858294413 | 48.41 % | 431006435 | 48.62 % | 427287978 | 48.20 % |
| Concept | Value |
|---|---|
| Unique Fragments | 646016356 |
| Average Unique | 72.88 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 104196102834 | 38.92 % | 42956957981 | 32.09 % | 61239144853 | 45.75 % |
| Base Counts Overall C | 28776534888 | 10.75 % | 1694247260 | 1.27 % | 27082287628 | 20.23 % |
| Base Counts Overall G | 29193123841 | 10.90 % | 27062605214 | 20.22 % | 2130518627 | 1.59 % |
| Base Counts Overall T | 103741236645 | 38.75 % | 61241693262 | 45.75 % | 42499543383 | 31.75 % |
| Base Counts Overall N | 1799071974 | 0.67 % | 897531374 | 0.67 % | 901540600 | 0.67 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | 0.9928300109476199 |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 718142668 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 150 | 886443941 |
| 150 | 886443941 |
| Insert Size Histogram |
|---|
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