/EXTERNAL CREST/K006434_1_lane_gembs/HPC20.Bisulfite-Seq.DNA_Methylation.JGAX00000006930_12

BACK

SAMPLE K006434_1_lane_gembs LANE HPC20.Bisulfite-Seq.DNA_Methylation.JGAX00000006930_12

Mapping Stats (Reads)

Concept Total Reads % Pair One Reads % Pair Two Reads %
Sequenced Reads 2099951564 100.00 % 2099951564 100.00 % 0 0.00 %
General Reads 1991826794 94.85 % 1991826794 94.85 % 0 0.00 %
Reads in Control sequences 0 0.00 % 0 0.00 % 0 0.00 %
Reads under conversion control 23007256 1.10 % 23007256 1.10 % 0 0.00 %
Reads over conversion control 0 0.00 % 0 0.00 % 0 0.00 %
Unmapped reads 85117514 4.05 % 85117514 4.05 % 0 0.00 %
Bisulfite_reads C2T 1000044978 47.62 % 1000044978 47.62 % 0 0.00 %
Bisulfite_reads G2A 1014789072 48.32 % 1014789072 48.32 % 0 0.00 %



Uniqueness (Fragments)

Concept Value
Unique Fragments 1532762454
Average Unique 76.07 %



Mapping Stats (Bases)

Concept Total Bases % Pair One Bases % Pair Two Bases %
Base Counts Overall A 87856976380 46.45 %
Base Counts Overall C 39992141910 21.14 %
Base Counts Overall G 4965109259 2.63 %
Base Counts Overall T 54160423749 28.63 %
Base Counts Overall N 2170711596 1.15 %



Bisulfite Conversion Rate

Bisulfite Conversion Type Conversion Rate
Conversion Rate 0.9025823806416888
Over Conversion Rate NA



Mapping Quality

Mapping Quality Histogram
HPC20.Bisulfite-Seq.DNA_Methylation.JGAX00000006930_12.mapq.png



Read Length

Read Length Reads
65 655707002
100 1444244562