/EXTERNAL CREST/K006431_1_lane_gembs/HPC6.Bisulfite-Seq.DNA_Methylation.JGAX00000006927_11

BACK

SAMPLE K006431_1_lane_gembs LANE HPC6.Bisulfite-Seq.DNA_Methylation.JGAX00000006927_11

Mapping Stats (Reads)

Concept Total Reads % Pair One Reads % Pair Two Reads %
Sequenced Reads 1490197307 100.00 % 1490197307 100.00 % 0 0.00 %
General Reads 1436576500 96.40 % 1436576500 96.40 % 0 0.00 %
Reads in Control sequences 0 0.00 % 0 0.00 % 0 0.00 %
Reads under conversion control 15083681 1.01 % 15083681 1.01 % 0 0.00 %
Reads over conversion control 0 0.00 % 0 0.00 % 0 0.00 %
Unmapped reads 38537126 2.59 % 38537126 2.59 % 0 0.00 %
Bisulfite_reads C2T 721806869 48.44 % 721806869 48.44 % 0 0.00 %
Bisulfite_reads G2A 729853312 48.98 % 729853312 48.98 % 0 0.00 %



Uniqueness (Fragments)

Concept Value
Unique Fragments 1097128827
Average Unique 75.58 %



Mapping Stats (Bases)

Concept Total Bases % Pair One Bases % Pair Two Bases %
Base Counts Overall A 71058426969 47.21 %
Base Counts Overall C 32327911509 21.48 %
Base Counts Overall G 3297473859 2.19 %
Base Counts Overall T 42100457314 27.97 %
Base Counts Overall N 1725658356 1.15 %



Bisulfite Conversion Rate

Bisulfite Conversion Type Conversion Rate
Conversion Rate 0.8917188515196448
Over Conversion Rate NA



Mapping Quality

Mapping Quality Histogram
HPC6.Bisulfite-Seq.DNA_Methylation.JGAX00000006927_11.mapq.png



Read Length

Read Length Reads
100 1490197307