/EXTERNAL ENCODE/K005711_K005708_2_lane_gembs/ENCFF800KIP_150bp_chastity
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 770490504 | 100.00 % | 385245252 | 100.00 % | 385245252 | 100.00 % |
| General Reads | 712307145 | 92.45 % | 348707924 | 90.52 % | 363599221 | 94.38 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 5558653 | 0.72 % | 2793758 | 0.73 % | 2764895 | 0.72 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 52624706 | 6.83 % | 33743570 | 8.76 % | 18881136 | 4.90 % |
| Bisulfite_reads C2T | 362822555 | 47.09 % | 177749229 | 46.14 % | 185073326 | 48.04 % |
| Bisulfite_reads G2A | 355043243 | 46.08 % | 173752453 | 45.10 % | 181290790 | 47.06 % |
| Concept | Value |
|---|---|
| Unique Fragments | 240909010 |
| Average Unique | 62.53 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 42434667953 | 36.47 % | 17483333905 | 30.05 % | 24951334048 | 42.89 % |
| Base Counts Overall C | 14655792255 | 12.60 % | 3863564923 | 6.64 % | 10792227332 | 18.55 % |
| Base Counts Overall G | 17473516859 | 15.02 % | 11315301262 | 19.45 % | 6158215597 | 10.59 % |
| Base Counts Overall T | 41001456857 | 35.24 % | 25123736857 | 43.19 % | 15877720000 | 27.29 % |
| Base Counts Overall N | 778632180 | 0.67 % | 386096105 | 0.66 % | 392536075 | 0.67 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | 0.9499364247866063 |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 272855040 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 150 | 385245252 |
| 150 | 385245252 |
| Insert Size Histogram |
|---|
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