/EXTERNAL ENCODE/K005729_K005715_2_lane_gembs/ENCFF220NMH_125bp_chastity
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 1094389768 | 100.00 % | 547194884 | 100.00 % | 547194884 | 100.00 % |
| General Reads | 1077449710 | 98.45 % | 539680788 | 98.63 % | 537768922 | 98.28 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 1864325 | 0.17 % | 934672 | 0.17 % | 929653 | 0.17 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 15075733 | 1.38 % | 6579424 | 1.20 % | 8496309 | 1.55 % |
| Bisulfite_reads C2T | 549828553 | 50.24 % | 275412391 | 50.33 % | 274416162 | 50.15 % |
| Bisulfite_reads G2A | 529485482 | 48.38 % | 265203069 | 48.47 % | 264282413 | 48.30 % |
| Concept | Value |
|---|---|
| Unique Fragments | 439800123 |
| Average Unique | 80.37 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 54377250374 | 39.43 % | 21033431111 | 30.51 % | 33343819263 | 48.36 % |
| Base Counts Overall C | 14120119471 | 10.24 % | 628038036 | 0.91 % | 13492081435 | 19.57 % |
| Base Counts Overall G | 14032362326 | 10.18 % | 13276945887 | 19.26 % | 755416439 | 1.10 % |
| Base Counts Overall T | 54244203427 | 39.34 % | 33458186500 | 48.53 % | 20786016927 | 30.15 % |
| Base Counts Overall N | 1119175170 | 0.81 % | 549953850 | 0.80 % | 569221320 | 0.83 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | 0.9883394146877876 |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 498617641 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 125 | 547194884 |
| 125 | 547194884 |
| Insert Size Histogram |
|---|
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