/EXTERNAL DEEP/K006045_K006046_K006047_K006048_K006049_K006049_K006050_6_lane_gembs
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 1062923278 | 100.00 % | 531461639 | 100.00 % | 531461639 | 100.00 % |
| General Reads | 1034027911 | 97.28 % | 520745910 | 97.98 % | 513282001 | 96.58 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 78 | 0.00 % | 40 | 0.00 % | 38 | 0.00 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 28895289 | 2.72 % | 10715689 | 2.02 % | 18179600 | 3.42 % |
| Bisulfite_reads C2T | 526486032 | 49.53 % | 265087551 | 49.88 % | 261398481 | 49.18 % |
| Bisulfite_reads G2A | 507541957 | 47.75 % | 255658399 | 48.10 % | 251883558 | 47.39 % |
| Concept | Value |
|---|---|
| Unique Fragments | 391545899 |
| Average Unique | 73.67 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 41092317452 | 38.28 % | 16111337270 | 30.01 % | 24980980182 | 46.54 % |
| Base Counts Overall C | 12375732355 | 11.53 % | 827685883 | 1.54 % | 11548046472 | 21.51 % |
| Base Counts Overall G | 12573347346 | 11.71 % | 11592267728 | 21.60 % | 981079618 | 1.83 % |
| Base Counts Overall T | 40209002615 | 37.45 % | 24604383631 | 45.84 % | 15604618984 | 29.07 % |
| Base Counts Overall N | 1104851310 | 1.03 % | 541951027 | 1.01 % | 562900283 | 1.05 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | NA |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 442461713 |
| Mapping Quality Histogram |
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| Insert Size Histogram |
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