/EXTERNAL DEEP/K006051_K006052_K006053_K006054_K006122_5_lane_gembs/41_Hf01.Bisulfite-Seq.DNA_methylation.EGAX00001422637.41
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 268291738 | 100.00 % | 134145869 | 100.00 % | 134145869 | 100.00 % |
| General Reads | 265182953 | 98.84 % | 133038548 | 99.17 % | 132144405 | 98.51 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 12 | 0.00 % | 6 | 0.00 % | 6 | 0.00 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 3108773 | 1.16 % | 1107315 | 0.83 % | 2001458 | 1.49 % |
| Bisulfite_reads C2T | 134960065 | 50.30 % | 67698689 | 50.47 % | 67261376 | 50.14 % |
| Bisulfite_reads G2A | 130222900 | 48.54 % | 65339865 | 48.71 % | 64883035 | 48.37 % |
| Concept | Value |
|---|---|
| Unique Fragments | 111719913 |
| Average Unique | 83.28 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 10600463273 | 39.12 % | 4174889832 | 30.81 % | 6425573441 | 47.43 % |
| Base Counts Overall C | 2806972896 | 10.36 % | 104736312 | 0.77 % | 2702236584 | 19.94 % |
| Base Counts Overall G | 2806431815 | 10.36 % | 2708136341 | 19.99 % | 98295474 | 0.73 % |
| Base Counts Overall T | 10567472509 | 39.00 % | 6426632289 | 47.43 % | 4140840220 | 30.56 % |
| Base Counts Overall N | 316125045 | 1.17 % | 134337995 | 0.99 % | 181787050 | 1.34 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | NA |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 127769761 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 100 | 134145869 |
| 100 | 134145869 |
| Insert Size Histogram |
|---|
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