/EXTERNAL DEEP/K006051_K006052_K006053_K006054_K006122_5_lane_gembs/41_Hf01.Bisulfite-Seq.DNA_methylation.EGAX00001422638.41
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 256811114 | 100.00 % | 128405557 | 100.00 % | 128405557 | 100.00 % |
| General Reads | 253693780 | 98.79 % | 127336282 | 99.17 % | 126357498 | 98.41 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 36 | 0.00 % | 20 | 0.00 % | 16 | 0.00 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 3117298 | 1.21 % | 1069255 | 0.83 % | 2048043 | 1.59 % |
| Bisulfite_reads C2T | 129102683 | 50.27 % | 64791005 | 50.46 % | 64311678 | 50.08 % |
| Bisulfite_reads G2A | 124591133 | 48.51 % | 62545297 | 48.71 % | 62045836 | 48.32 % |
| Concept | Value |
|---|---|
| Unique Fragments | 106773253 |
| Average Unique | 83.15 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 10147573059 | 39.12 % | 3997992784 | 30.83 % | 6149580275 | 47.42 % |
| Base Counts Overall C | 2682437697 | 10.34 % | 100309459 | 0.77 % | 2582128238 | 19.91 % |
| Base Counts Overall G | 2682156048 | 10.34 % | 2588106749 | 19.96 % | 94049299 | 0.73 % |
| Base Counts Overall T | 10116320213 | 39.00 % | 6153930327 | 47.45 % | 3962389886 | 30.55 % |
| Base Counts Overall N | 309435497 | 1.19 % | 128621938 | 0.99 % | 180813559 | 1.39 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | NA |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 122130946 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 100 | 128405557 |
| 100 | 128405557 |
| Insert Size Histogram |
|---|
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