/EXTERNAL DEEP/K006051_K006052_K006053_K006054_K006122_5_lane_gembs/41_Hf01.Bisulfite-Seq.DNA_methylation.EGAX00001422639.41
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 252745910 | 100.00 % | 126372955 | 100.00 % | 126372955 | 100.00 % |
| General Reads | 249687807 | 98.79 % | 125318382 | 99.17 % | 124369425 | 98.41 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 22 | 0.00 % | 11 | 0.00 % | 11 | 0.00 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 3058081 | 1.21 % | 1054562 | 0.83 % | 2003519 | 1.59 % |
| Bisulfite_reads C2T | 127089167 | 50.28 % | 63776970 | 50.47 % | 63312197 | 50.10 % |
| Bisulfite_reads G2A | 122598662 | 48.51 % | 61541423 | 48.70 % | 61057239 | 48.32 % |
| Concept | Value |
|---|---|
| Unique Fragments | 105006506 |
| Average Unique | 83.09 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 9987348143 | 39.12 % | 3935770386 | 30.84 % | 6051577757 | 47.41 % |
| Base Counts Overall C | 2637478450 | 10.33 % | 98440749 | 0.77 % | 2539037701 | 19.89 % |
| Base Counts Overall G | 2636189785 | 10.33 % | 2544433212 | 19.93 % | 91756573 | 0.72 % |
| Base Counts Overall T | 9956870253 | 39.00 % | 6058459458 | 47.47 % | 3898410795 | 30.54 % |
| Base Counts Overall N | 309450279 | 1.21 % | 126564650 | 0.99 % | 182885629 | 1.43 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | NA |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 120157580 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 100 | 126372955 |
| 100 | 126372955 |
| Insert Size Histogram |
|---|
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