/EXTERNAL DEEP/K006051_K006052_K006053_K006054_K006122_5_lane_gembs
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 1170541650 | 100.00 % | 585270825 | 100.00 % | 585270825 | 100.00 % |
| General Reads | 1152652577 | 98.47 % | 578468864 | 98.84 % | 574183713 | 98.11 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 1610 | 0.00 % | 866 | 0.00 % | 744 | 0.00 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 17887463 | 1.53 % | 6801095 | 1.16 % | 11086368 | 1.89 % |
| Bisulfite_reads C2T | 586380107 | 50.09 % | 294227329 | 50.27 % | 292152778 | 49.92 % |
| Bisulfite_reads G2A | 566274080 | 48.38 % | 284242401 | 48.57 % | 282031679 | 48.19 % |
| Concept | Value |
|---|---|
| Unique Fragments | 458983246 |
| Average Unique | 78.42 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 45201423326 | 38.34 % | 17722365621 | 30.15 % | 27479057705 | 46.49 % |
| Base Counts Overall C | 13292680237 | 11.27 % | 817243881 | 1.39 % | 12475436356 | 21.10 % |
| Base Counts Overall G | 13464276670 | 11.42 % | 12543019188 | 21.34 % | 921257482 | 1.56 % |
| Base Counts Overall T | 44607613901 | 37.84 % | 27117798255 | 46.13 % | 17489815646 | 29.59 % |
| Base Counts Overall N | 1333367440 | 1.13 % | 586581304 | 1.00 % | 746786136 | 1.26 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | 0.6758427165097497 |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 527555273 |
| Mapping Quality Histogram |
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| Insert Size Histogram |
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