/EXTERNAL DEEP/K006055_K006056_K006123_K006124_K006125_5_lane_gembs/41_Hf02.Bisulfite-Seq.DNA_methylation.EGAX00001422697.41
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 133974242 | 100.00 % | 66987121 | 100.00 % | 66987121 | 100.00 % |
| General Reads | 132888298 | 99.19 % | 66495016 | 99.27 % | 66393282 | 99.11 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 6 | 0.00 % | 3 | 0.00 % | 3 | 0.00 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 1085938 | 0.81 % | 492102 | 0.73 % | 593836 | 0.89 % |
| Bisulfite_reads C2T | 67601929 | 50.46 % | 33825192 | 50.50 % | 33776737 | 50.42 % |
| Bisulfite_reads G2A | 65286375 | 48.73 % | 32669827 | 48.77 % | 32616548 | 48.69 % |
| Concept | Value |
|---|---|
| Unique Fragments | 55796166 |
| Average Unique | 83.29 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 5092996157 | 38.99 % | 1907719010 | 30.30 % | 3185277147 | 47.08 % |
| Base Counts Overall C | 1468394898 | 11.24 % | 45368025 | 0.72 % | 1423026873 | 21.03 % |
| Base Counts Overall G | 1376764626 | 10.54 % | 1333742724 | 21.18 % | 43021902 | 0.64 % |
| Base Counts Overall T | 4988122795 | 38.19 % | 2942133851 | 46.72 % | 2045988944 | 30.24 % |
| Base Counts Overall N | 136210119 | 1.04 % | 67825764 | 1.08 % | 68384355 | 1.01 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | NA |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 64281229 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 93 | 66987121 |
| 100 | 66987121 |
| Insert Size Histogram |
|---|
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