/EXTERNAL DEEP/K006057_K006058_K006059_K006060_K006061_K006062_6_lane_gembs/41_Hf03.Bisulfite-Seq.DNA_methylation.EGAX00001422707.41
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 193546868 | 100.00 % | 96773434 | 100.00 % | 96773434 | 100.00 % |
| General Reads | 191427135 | 98.90 % | 95904892 | 99.10 % | 95522243 | 98.71 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 42646 | 0.02 % | 21393 | 0.02 % | 21253 | 0.02 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 2077087 | 1.07 % | 847149 | 0.88 % | 1229938 | 1.27 % |
| Bisulfite_reads C2T | 99330336 | 51.32 % | 49751140 | 51.41 % | 49579196 | 51.23 % |
| Bisulfite_reads G2A | 92139445 | 47.61 % | 46175145 | 47.71 % | 45964300 | 47.50 % |
| Concept | Value |
|---|---|
| Unique Fragments | 73437701 |
| Average Unique | 75.89 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 7274966114 | 37.22 % | 3184552465 | 32.58 % | 4090413649 | 41.85 % |
| Base Counts Overall C | 2381172568 | 12.18 % | 99873489 | 1.02 % | 2281299079 | 23.34 % |
| Base Counts Overall G | 2413698527 | 12.35 % | 2319068965 | 23.73 % | 94629562 | 0.97 % |
| Base Counts Overall T | 7231457891 | 36.99 % | 4022049401 | 41.15 % | 3209408490 | 32.84 % |
| Base Counts Overall N | 246938568 | 1.26 % | 148572514 | 1.52 % | 98366054 | 1.01 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | 0.9951136946627435 |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 90700007 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 100 | 96773434 |
| 100 | 96773434 |
| Insert Size Histogram |
|---|
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