/EXTERNAL DEEP/K006063_K006064_K006065_K006066_4_lane_gembs/43_Hm03.Bisulfite-Seq.DNA_methylation.EGAX00001422815.43
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 354403800 | 100.00 % | 177201900 | 100.00 % | 177201900 | 100.00 % |
| General Reads | 349327024 | 98.57 % | 175246822 | 98.90 % | 174080202 | 98.24 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 1552439 | 0.44 % | 779489 | 0.44 % | 772950 | 0.44 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 3524337 | 0.99 % | 1175589 | 0.66 % | 2348748 | 1.33 % |
| Bisulfite_reads C2T | 180155035 | 50.83 % | 90369400 | 51.00 % | 89785635 | 50.67 % |
| Bisulfite_reads G2A | 170724428 | 48.17 % | 85656911 | 48.34 % | 85067517 | 48.01 % |
| Concept | Value |
|---|---|
| Unique Fragments | 147266942 |
| Average Unique | 83.11 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 14164936301 | 39.57 % | 5748924859 | 32.12 % | 8416011442 | 47.02 % |
| Base Counts Overall C | 3601226368 | 10.06 % | 161572491 | 0.90 % | 3439653877 | 19.22 % |
| Base Counts Overall G | 3645581496 | 10.18 % | 3490751971 | 19.50 % | 154829525 | 0.87 % |
| Base Counts Overall T | 14028468389 | 39.19 % | 8318782562 | 46.48 % | 5709685827 | 31.90 % |
| Base Counts Overall N | 354571246 | 0.99 % | 177360017 | 0.99 % | 177211229 | 0.99 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | 0.9913550114243169 |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 168380717 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 100 | 177201900 |
| 100 | 177201900 |
| Insert Size Histogram |
|---|
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