/EXTERNAL DEEP/K006107_K006108_2_lane_gembs/51_Hf05.Bisulfite-Seq.DNA_methylation.EGAX00001423331.51

BACK

SAMPLE K006107_K006108_2_lane_gembs LANE 51_Hf05.Bisulfite-Seq.DNA_methylation.EGAX00001423331.51

Mapping Stats (Reads)

Concept Total Reads % Pair One Reads % Pair Two Reads %
Sequenced Reads 432181876 100.00 % 216090938 100.00 % 216090938 100.00 %
General Reads 422215305 97.69 % 212108385 98.16 % 210106920 97.23 %
Reads in Control sequences 0 0.00 % 0 0.00 % 0 0.00 %
Reads under conversion control 1366227 0.32 % 688909 0.32 % 677318 0.31 %
Reads over conversion control 0 0.00 % 0 0.00 % 0 0.00 %
Unmapped reads 8600344 1.99 % 3293644 1.52 % 5306700 2.46 %
Bisulfite_reads C2T 217498984 50.33 % 109242182 50.55 % 108256802 50.10 %
Bisulfite_reads G2A 206082548 47.68 % 103555112 47.92 % 102527436 47.45 %



Uniqueness (Fragments)

Concept Value
Unique Fragments 142872890
Average Unique 66.12 %



Mapping Stats (Bases)

Concept Total Bases % Pair One Bases % Pair Two Bases %
Base Counts Overall A 16149169740 37.00 % 6221594051 28.51 % 9927575689 45.49 %
Base Counts Overall C 5609928896 12.85 % 550740012 2.52 % 5059188884 23.18 %
Base Counts Overall G 5925531566 13.57 % 5230347018 23.96 % 695184548 3.19 %
Base Counts Overall T 15525976180 35.57 % 9606284746 44.01 % 5919691434 27.12 %
Base Counts Overall N 439763094 1.01 % 216218911 0.99 % 223544183 1.02 %



Bisulfite Conversion Rate

Bisulfite Conversion Type Conversion Rate
Conversion Rate 0.9789983967838015
Over Conversion Rate NA



Correct Pairs

Concept Total Reads
Correct Pairs 166570633



Mapping Quality

Mapping Quality Histogram
51_Hf05.Bisulfite-Seq.DNA_methylation.EGAX00001423331.51.mapq.png



Read Length

Read Length Reads
100 216090938
100 216090938



Insert Size Plot

Insert Size Histogram
51_Hf05.Bisulfite-Seq.DNA_methylation.EGAX00001423331.51.isize.png