/EXTERNAL CREST/K006469_1_lane_gembs/JKU017.Bisulfite-Seq.DNA_Methylation.JGAX00000016060.JKU017_WGBS

BACK

SAMPLE K006469_1_lane_gembs LANE JKU017.Bisulfite-Seq.DNA_Methylation.JGAX00000016060.JKU017_WGBS

Mapping Stats (Reads)

Concept Total Reads % Pair One Reads % Pair Two Reads %
Sequenced Reads 148353913 100.00 % 148353913 100.00 % 0 0.00 %
General Reads 142944593 96.35 % 142944593 96.35 % 0 0.00 %
Reads in Control sequences 0 0.00 % 0 0.00 % 0 0.00 %
Reads under conversion control 1517510 1.02 % 1517510 1.02 % 0 0.00 %
Reads over conversion control 0 0.00 % 0 0.00 % 0 0.00 %
Unmapped reads 3891810 2.62 % 3891810 2.62 % 0 0.00 %
Bisulfite_reads C2T 71702840 48.33 % 71702840 48.33 % 0 0.00 %
Bisulfite_reads G2A 72759263 49.04 % 72759263 49.04 % 0 0.00 %



Uniqueness (Fragments)

Concept Value
Unique Fragments 105504984
Average Unique 73.03 %



Mapping Stats (Bases)

Concept Total Bases % Pair One Bases % Pair Two Bases %
Base Counts Overall A 6894108235 45.56 %
Base Counts Overall C 3559220408 23.52 %
Base Counts Overall G 339423215 2.24 %
Base Counts Overall T 4189488534 27.69 %
Base Counts Overall N 149858734 0.99 %



Bisulfite Conversion Rate

Bisulfite Conversion Type Conversion Rate
Conversion Rate 0.8933955606111723
Over Conversion Rate NA



Mapping Quality

Mapping Quality Histogram
JKU017.Bisulfite-Seq.DNA_Methylation.JGAX00000016060.JKU017_WGBS.mapq.png



Read Length

Read Length Reads
101 148353913