/EXTERNAL CREST/K006450_1_lane_gembs/JKU014.Bisulfite-Seq.DNA_Methylation.JGAX00000011811_2

BACK

SAMPLE K006450_1_lane_gembs LANE JKU014.Bisulfite-Seq.DNA_Methylation.JGAX00000011811_2

Mapping Stats (Reads)

Concept Total Reads % Pair One Reads % Pair Two Reads %
Sequenced Reads 1707489411 100.00 % 1707489411 100.00 % 0 0.00 %
General Reads 1642525923 96.20 % 1642525923 96.20 % 0 0.00 %
Reads in Control sequences 0 0.00 % 0 0.00 % 0 0.00 %
Reads under conversion control 11965381 0.70 % 11965381 0.70 % 0 0.00 %
Reads over conversion control 0 0.00 % 0 0.00 % 0 0.00 %
Unmapped reads 52998107 3.10 % 52998107 3.10 % 0 0.00 %
Bisulfite_reads C2T 822752334 48.18 % 822752334 48.18 % 0 0.00 %
Bisulfite_reads G2A 831738970 48.71 % 831738970 48.71 % 0 0.00 %



Uniqueness (Fragments)

Concept Value
Unique Fragments 1233588489
Average Unique 74.56 %



Mapping Stats (Bases)

Concept Total Bases % Pair One Bases % Pair Two Bases %
Base Counts Overall A 85207270039 46.73 %
Base Counts Overall C 40944481559 22.46 %
Base Counts Overall G 3685773326 2.02 %
Base Counts Overall T 50726496049 27.82 %
Base Counts Overall N 1774714479 0.97 %



Bisulfite Conversion Rate

Bisulfite Conversion Type Conversion Rate
Conversion Rate 0.8799388330369806
Over Conversion Rate NA



Mapping Quality

Mapping Quality Histogram
JKU014.Bisulfite-Seq.DNA_Methylation.JGAX00000011811_2.mapq.png



Read Length

Read Length Reads
116 544987702
101 1162501709