/EXTERNAL BLUEPRINT/K011719_1_lane_gembs/EXTERNAL-K011719_1894661_2
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 132791584 | 100.00 % | 66395792 | 100.00 % | 66395792 | 100.00 % |
| General Reads | 126073384 | 94.94 % | 63362364 | 95.43 % | 62711020 | 94.45 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 5 | 0.00 % | 3 | 0.00 % | 2 | 0.00 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 6718195 | 5.06 % | 3033425 | 4.57 % | 3684770 | 5.55 % |
| Bisulfite_reads C2T | 65209070 | 49.11 % | 32764430 | 49.35 % | 32444640 | 48.87 % |
| Bisulfite_reads G2A | 60864319 | 45.83 % | 30597937 | 46.08 % | 30266382 | 45.58 % |
| Concept | Value |
|---|---|
| Unique Fragments | 47379946 |
| Average Unique | 71.36 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 3568154973 | 34.90 % | 1392836597 | 27.24 % | 2175318376 | 42.55 % |
| Base Counts Overall C | 1495703722 | 14.63 % | 231760730 | 4.53 % | 1263942992 | 24.72 % |
| Base Counts Overall G | 1535606333 | 15.02 % | 1270204456 | 24.85 % | 265401877 | 5.19 % |
| Base Counts Overall T | 3491706684 | 34.15 % | 2150950339 | 42.07 % | 1340756345 | 26.23 % |
| Base Counts Overall N | 133780256 | 1.31 % | 66723862 | 1.31 % | 67056394 | 1.31 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | NA |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 58481796 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 76 | 66395792 |
| 76 | 66395792 |
| Insert Size Histogram |
|---|
 |