/EXTERNAL BLUEPRINT/K011720_1_lane_gembs/EXTERNAL-K011720_1894662_2
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 80060856 | 100.00 % | 40030428 | 100.00 % | 40030428 | 100.00 % |
| General Reads | 74917466 | 93.58 % | 37648718 | 94.05 % | 37268748 | 93.10 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 20 | 0.00 % | 10 | 0.00 % | 10 | 0.00 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 5143370 | 6.42 % | 2381700 | 5.95 % | 2761670 | 6.90 % |
| Bisulfite_reads C2T | 38774875 | 48.43 % | 19481530 | 48.67 % | 19293345 | 48.20 % |
| Bisulfite_reads G2A | 36142611 | 45.14 % | 18167198 | 45.38 % | 17975413 | 44.90 % |
| Concept | Value |
|---|---|
| Unique Fragments | 28406367 |
| Average Unique | 70.96 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 2185737504 | 35.46 % | 847355499 | 27.49 % | 1338382005 | 43.42 % |
| Base Counts Overall C | 863717269 | 14.01 % | 108453482 | 3.52 % | 755263787 | 24.50 % |
| Base Counts Overall G | 896136994 | 14.54 % | 762820678 | 24.75 % | 133316316 | 4.33 % |
| Base Counts Overall T | 2137614039 | 34.68 % | 1322819764 | 42.92 % | 814794275 | 26.43 % |
| Base Counts Overall N | 81480106 | 1.32 % | 40893533 | 1.33 % | 40586573 | 1.32 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | NA |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 34911621 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 76 | 40030428 |
| 76 | 40030428 |
| Insert Size Histogram |
|---|
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